Lyric discussion by the little red man 

I commented on the other version, but anyway, I figured I'd comment here too.

I'm not sure, but to me this seems to tell the story of two close friends (or maybe literal brothers), and one of them has messed up, and he's talking about how it affects him as well.

Obviously the line "What have you done, my son, with your desire? ", seems to suggest this.

"I'll pray for us to make it through " seems to be referring to them making it through this situation, until it's blown over.

I'm probably wrong.

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